Sequence and Comparative Analysis of the Mouse 1-Megabase Region Orthologous to the Human 11p15 Imprinted Domain

Table 1.

STSs Used to Identify BACs within the Mouse Imprinted Domain Orthologous to Human 11p15

Overgo probe Oligo A sequence Oligo B sequence GenBank accession
nap114.1 GTTCTGGTTTACCATCTTCAGA AGCATGTCCACATTTCTGAAGA AC001228
nap114.3 TACAGTGTTTTCAATTTGTACA TATTCTAACTATTCTGTACAAA AC001228
pac1.2 ATATCTAGGCCTCCATGCCTTC CCTCGTGTGTTTGTGAAGGCAT AF093714
pac1.1 CCTGGTCATCCCTCTGGAATCC ATAGAGGGATGGGAGGATTCCA AF093714
KvL-18.1 TCCTTGGGCTTGGGCACCACGC TTGATTTCTGTGAGGCGTGGTG U70068
KvL-17.1 GCACACCCACCTGGTTCTCACC CAGGCCTTCAAGGGGGTGAGAA U70068
KvL-16.1 CATCACAGACATGCTCCACCAG TGCATGGACAGCAGCTGGTGGA U70068
KvL-15.1 GAGCAAAGACCGTGGCAGTAAC CGGGCACCGATGGTGTTACTGC U70068
KvL-14.1 CAGTCCATTGGGAAGCCATCTT GATGGGGATGAACAAAGATGGC U70068
KvL-13.1 CGTGCGAGATGTCATCGAGCAG TGGCCCTGGGAGTACTGCTCGA U70068
KvL-12.2 GGTCATCAGGCGCATGCAGTAC TTCTTGGCTACAAAGTACTGCA U70068
KvL-11.2 TGGACCTGGAAGGGGAGACACT TGATGGGGGTCAGCAGTGTCTC U70068
KvL-11.1 TGCTGGAATTAAGCACACCCCA TTGTTCTCAAGAAATGGGGTGT U70068
KvL-10.2 TCCCCCAGAGGATAGGAGGCCA ATGGAGAAATGGTCTGGCCTCC U70068
KvL-10.1 GTAAAGAAGAAGAAGTTCAAGC ATTATCCTTATCCAGCTTGAAC U70068
KvL-9.1 AAGCCTGCCGGAGTCACACGC GCTGGGGGACAGAAGCGTGTGA U70068
KvL-8.1 GCAGAAGCACTTCAACCGGCAG GCTGCAGCTGGGATCTGCCGGT U70068
KvL-7.1 ACCTCAGACGTGGGTTGGGAAG CAGGAGGCGATGGTCTTCCCAA U70068
KVLQT1.1 GAGTTTGGCAGCTACGCAGATG CCCCCACCACAGAGCATCTGCG U70068
KvL-6.1 GGCCGCATCGAGTTTGGCAGCT CAGAGCATCTGCGTAGCTGCCA U70068
KvL-5.1 CTTCAGATCCTGCGGATGCTGC CTGGCGATCGACATGCAGCATC U70068
KvL-4.1 TGCGTGGGTTCCAAAGGACAAG TGATGTGGCGAACACTTGTCCT U70068
KvLQT.1 GTACGTGGGCATCTGGGGCCGG CGGGCAAAACGTAGCCGGCCCC U70068
KvL-3.1 AAGTACGTGGGCATCTGGGGCC GGCAAAACGTAGCCGGCCCCAG U70068
KvL-2.2 GTATGCCGCTCTGGCCACCGGG ATCCAGAAGAGGGTCCCGGTGG U70068
KvL-2.1 TCCTCATTGTTCTGGTCTGCCT GGACACTGAAGATGAGGCAGAC U70068
KVLQT1.3 TGGCGCGCACCCACATCCAGGG AGTTGTAGACTCGGCCCTGGAT U70068
KvL-1.2 GTGAGCCTTGACCCGCGGGTCT CGCACTGTAGATGGAGACCCGC U70068
tssc4.1 CACCCTGAGCGTTGGACCAAAT ATCCTCCAGACTGTATTTGGTC AA241958
tapa1.2 ATTCTGAGCATGGTGCTGTGCT GTTCCGGATGCCACAGCACAGC X59047
pac2.2 GAGTTTTGTCTGGCATTGCTTG CATCCAAAAACGGCCAAGCAAT AF093715
tapa1.1 CGCCAAGGATGTGAAGCAGTTC AGGGCCTGGTCATAGAACTGCT X59047
pac2.1 GAGGAGCCTTCAGTCTTCCTTG GAGCCTGTTCTTCTCAAGGAAG AF093715
tssc6.2 GTGGCCTTCTGGAGATTCTACA CACCTGGGTGGGGTTGTAGAAT AA200225
tssc6.3 CTATGTGGGGATCAGCCTAGCG AGGCTCAGGAGCCCCGCTAGGC AA200225
mash2.1 CAGCTTCTTGTTGGCGCCGCCG CAGCACGTGCCGCACGGCGGCG U77628
mash2.2 GGAAGCCCAAGTTTACCAGCTT AGCGCAACCGCGTAAAGCTGGT U77628
pac3.1 ATCAGGCCAGTTACTTCTGGAC AGCAGCACGTCTGTGTCCAGAA AF093708
th.3 GCAGAGTCTCATCGAGGATGCC TCCCGCTCCTTGCGGGCATCCT M69200
th.1 CAAGGAAAGTGTCAGAGTTGGA GGTGGTGACACTTATCCAACTC M69200
th.2 GCCAGTCTGGCCTTCCGTGTGT CTGTGTGCACTGAAACACACGG M69200
igf2.1 GAAGCACCAACATCGACTTCCC TGGGGATCCCAGTGGGGAAGTC M14951
igf2.2 TGTCATATTGGAAGAACTTGCC CCAGATACCCCGTGGGCAAGTT M14951
h19.1 CAAGTCCACTGTGGGCCCTTTC CAGGGACTGGTGCGGAAAGGGC X07201
h19.2 GGATTCAAAGGCCCAGACATCA TGGTCCTACCCAGCTGATGTCT X07201

This Article

  1. Genome Res. 10: 1697-1710

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