Table 4.
Genes, Putative Genes, and Psuedogenes from the VWS Critical Region
| Gene | Homologous sequence | BLAST Evalue | Unigene no. | Poly(A) site | Exons | Genomic size (kb) | |||||||
| Human | Mouse | Rat | |||||||||||
| ADORA2BP | ADORA 2B pseudogene | e-142 | none | none | none | N | |||||||
| GOS2 | cyclin-like | 0 | Hs.95910 | Mm.3283 | Rn.1040 | Y | 2 | 4.5 | |||||
| HIPP | HIP pseudogene | e-243 | none | none | N | ||||||||
| HSD11 | dehydrogenase | 0 | Hs.37012 | Mm.28328 | none | Y | 6 | 9 | |||||
| LAMB3 | laminin | 0 | Hs.75517 | Mm.4732 | none | Y | 23 | 29 | |||||
| RNASEH1P | RNASEH1 pseudogene | e-168 | none | none | none | N | |||||||
| VWS1 | rat CamPKI | e-42 | R05661 | W87080 | AI547446 | Y | >5 | >30 | |||||
| VWS2 | yeast ORF P40498 | e-46 | Hs.169207 | Mm.31551 | Rn.23222 | Y | >12 | >24 | |||||
| VWS8 | HIRF6 | 0 | Hs.11801 | Mm.4179 | none | Y | 8 | 13.5 | |||||
| VWS14 | EST 897026 | e-60 | none | none | none | Y | >1 | >0.3 | |||||
| VWS17 | EST 2021286 | e-73 | Hs.87684 | Mm.32382 | Rn.28176, Rn.19232 | Y | >13 | >26 | |||||
| VWS18 | EST 222591 | e-32 | Hs.130270 | none | none | N | 5 | >150 | |||||
| VWS19 | EST HIBBR80 | 0 | T09285 | none | none | N | >3 | >13.9 | |||||
| VWS20 | EST 1505352 | 0 | Hs.128561 | none | none | N | |||||||
| VWS23 | EST 911663 | e-116 | AA483782 | none | none | N | |||||||
| VWS25 | EST 1114940 | e-112 | AA601997 | none | none | Y | |||||||
| VWS26 | EST 78732 | e-147 | AA601997 | none | none | N | |||||||
| VWS30 | EST 21276 | e-109 | Hs.150643 | none | Rn.35063 | Y | >1 | >0.6 | |||||
| VWS31 | EST 25987 | e-82 | Hs.21068 | none | none | Y | >2 | >4.4 | |||||
| VWS33 | EST 1326264 | e-55 | Hs.156229 | none | none | Y | >1 | >0.6 | |||||
| VWS34 | EST 1157683 | e-54 | Hs.25536 | none | none | Y | >4 | >3.7 | |||||
| VWS35 | EST 1560831 | e-63 | Hs.58102 | none | Rn.15497 | Y | >4 | >2.5 | |||||
| VWS37 | EST 609657 | e-65 | Hs.185761 | none | none | N | |||||||
| VWS38 | EST 628633 | e-94 | None | none | none | N | |||||||
| VWS40 | EST 182501-like | e-12 | Hs.99229-like | none | none | N | |||||||
| VWS41 | EST 72618 | e-139 | AA362845 | none | none | N | |||||||
| VWS42 | EST 01691 | e-114 | M78101 | none | none | N | |||||||
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↵ E value is shown as an exponent (e) with base 10.
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↵For genes that lack a Unigene number, only a single GenBank accession no. is listed, although other near identical ESTs were observed in dbEST.
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↵(>) A minimum number of exons and genomic size for the gene, as the complete cDNA sequence is not known.
