Results on Chromosome 22 Based on the Annotation and Sequence Used by Collins et al. (2003)
TP | FP | Total # of TSSs | Total # of predictions | Se | ppv | ASM | CC | |
|---|---|---|---|---|---|---|---|---|
| Dragon GSF | 269 | 69 | 393 | 898 | 0.6845 | 0.7959 | 1.1818 | 0.7381 |
| FirstEF | 331 | 501 | 393 | 2595 | 0.8422 | 0.3978 | 3.6364 | 0.5789 |
| FirstEF (CpG+) | 310 | 185 | 393 | 1428 | 0.7888 | 0.6263 | 2.1818 | 0.7028 |
| Eponine | 199 | 79 | 393 | 2066 | 0.5064 | 0.7158 | 3.0000 | 0.6021 |
[i] The maximum allowed distance between the predicted TSS and real TSS is 2000 nt