Expression/Solubility Data for the Most Common Pfam Domainsa
Countb | %Exp | %Sol | Domain length | Pfam | Description |
|---|---|---|---|---|---|
| 60 | 78.3 | 23.3 | 104 | Motile-Sperm | Major sperm protein domain |
| 34 | 70.6 | 17.6 | 111 | Histone | Core histone H2A/H2B/H3/H4 |
| 72 | 69.4 | 25.0 | 71 | RRM-1 | RNA recognition motif |
| 38 | 68.4 | 2.6 | 70 | GST-N | GST, N-terminal |
| 44 | 65.9 | 18.2 | 247 | Adh-short | Short chain dehydrogenase |
| 48 | 64.6 | 4.2 | 163 | Ras | Ras family |
| 63 | 57.1 | 3.2 | 38 | WD40 | WD domain, G-beta repeat |
| 49 | 44.9 | 18.4 | 80 | Helicase-C | Helicase conserved C-terminal |
| 38 | 44.7 | 10.5 | 56 | Homeobox | Homeobox domain |
| 35 | 40.0 | 2.9 | 208 | Metallophos | Calcineurin-like phosphoesterase |
| 56 | 39.3 | 5.4 | 106 | BTB | BTB/POZ domain |
| 236 | 39.0 | 6.4 | 275 | Pkinase | Protein kinase domain |
| 47 | 31.9 | 4.3 | 114 | MATH | MATH domain |
| 35 | 31.4 | 2.9 | 117 | DUF290 | Transthyretin-like family |
| 65 | 27.7 | 10.8 | 77 | zf-C4 | Zinc finger, C4 type |
| 68 | 26.5 | 0 | 45 | F-box | F-box domain |
| 56 | 25.0 | 0 | 142 | FTH | FTH domain |
| 48 | 22.9 | 10.4 | 232 | Y-phosphatase | Protein-tyrosine phosphatase |
| 41 | 22.0 | 9.8 | 195 | Hormone-recep | Ligand-binding domain of nuclear hormone receptor |
| 46 | 10.9 | 0 | 212 | Neur-chan-LBD | Neurotransmitter-gated ion-channel |
| 39 | 7.7 | 0 | 294 | 7tm-5 | 7TM chemoreceptor |
| 41 | 7.3 | 0 | 202 | Neur-chan-memb | Neurotransmitter-gated ion-channel |
| 105 | 6.7 | 1.9 | 59 | Collagen | Collagen triple helix repeat |
| 70 | 2.9 | 1.4 | 61 | Col-cuticle-N | Nematode cuticle collagen N-terminal |
| 57 | 1.8 | 0 | 37 | ShTK | ShTK domain |
a The list is sorted on % Expressed. %Exp stands for %Expressed, and %Sol for %Soluble.
b The 33 count is 2% of total 1689 distinct pfams in the studied sequences. The list contains all with count >2% of the 1689 distinct Pfams in the studied sequences.