Table 3B.

Named Cross-Boundary and Segmental Duplication Transcripts


Tel

Region

Cov

Id

Transcript

Accession
2q x-bndry 83.04 99 similar to bA476l15.3 (novel protein similar to septin) (LOC339493) XM_290927
4p x-bndry 99.18 98 similar to zinc finger protein 208, clone MGC:41929 BC043151
5p x-bndry 100 99 arylhydrocarbon receptor repressor (AHRR), mRNA NM_020731
5p x-bndry 98.61 98 programmed cell death 6 (PDCD6), mRNA NM_013232
6p x-bndry 97.43 99 dual specificity phosphatase 22 (DUSP22), mRNA NM_020185
7p x-bndry 83.04 97 similar to bA476l15.3 (novel protein similar to septin) (LOC339493) XM_290927
8p x-bndry 71.74 99 F-box only protein 25 (FBXO25), mRNA NM_012173
10q x-bndry 100 100 similar to olfactory receptor MOR103-5 (LOC347752), mRNA XM_301226
11p x-bndry 89.29 97 outer dense fiber of sperm tails 3 (ODF3), mRNA NM_053280
16p x-bndry 100 100 polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kD (POLR3K) NM_016310
16p x-bndry 99.17 100 axin 1 (AXIN1), transcript variant 1, mRNA NM_003502
16q x-bndry 98.37 99 PR domain containing 7 (PRDM7), mRNA NM_052996
17p x-bndry 99.7 99 double C2-like domains, β (DOC2B), mRNA NM_003585
17p x-bndry 99.61 99 rabphilin 3A-like (without C2 domains) (RPH3AL), mRNA NM_006987
21q x-bndry 100 100 disco-interacting protein 2 (Drosophila) homolog (DIP2), mRNA NM_015151
22q x-bndry 98.99 99 acrosin (ACR), mRNA NM_001097
Xp/Yp x-bndry 100 100 short stature homeobox (SHOX), transcript variant SHOXa, mRNA NM_000451
Xq x-bndry 99.17 100 interleukin 9 receptor (IL9R), transcript variant 2, mRNA NM_176786
Xq x-bndry 100 100 similar to transient receptor potential cation channel, subfam C, mem 6 XM_066809
Xq x-bndry 99.5 100 synaptobrevin-like 1 (SYBL1), mRNA NM_005638
Xq x-bndry 100 99 sprouty homolog 3 (Drosophila) (SPRY3), mRNA NM_005840
4q SD 100 98 FSHD region gene 1 (FRG1), mRNA NM_004477
5p SD 99.96 99 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA) NM_004168
6q SD 99.08 100 programmed cell death 2 (PDCD2), transcript variant 2, mRNA NM_144781
6q SD 100 100 proteasome (prosome, macropain) subunit, β type, 1 (PSMB1) NM_002793
6q SD 98.88 98 TATA box binding protein (TBP), mRNA NM_003194
9p SD 100 100 forkhead box D4 (FOXD4), mRNA XM_095746
9p SD 98.85 98 3′ similar to gb:M83088 PHOSPHOGLUCOMUTASE (HUMAN) H12280
9p SD 99.33 98 similar to COBW-like protein, clone IMAGE:5287337, mRNA BC043420
14q SD 97.75 100 similar to immunogloblin heavy-chain variable region, clone MGC:45495 BC032733
Xp/Yp SD 100 100 protein phosphatase 2A 48 kD regulatory subunit (PR48), mRNA NM_013239
Yq
SD
74.59
98
B melanoma antigen variant d (BAGE1) mRNA
AF527552