Table 3.

Missing Call Accuracy in Genotyped Parent With Other Parent Missing

10 Families
160 Families
320 Families
Children
MCAa
BMCAb
MCA
BMCA
MCA
BMCA
All sitesc
    0 0.855 (0.003) 0.771 (0.004) 0.929 (0.001) 0.869 (0.002) 0.930 (0.001) 0.874 (0.002)
    1 0.916 (0.002) 0.812 (0.003) 0.950 (0.0007) 0.894 (0.002) 0.948 (0.0007) 0.899 (0.002)
    2 0.944 (0.002) 0.844 (0.004) 0.964 (0.0006) 0.914 (0.002) 0.964 (0.0005) 0.917 (0.001)
    3 0.964 (0.002) 0.893 (0.004) 0.977 (0.0004) 0.940 (0.001) 0.976 (0.0003) 0.942 (0.001)
q < 0.10c
    0 0.812 (0.005) 0.646 (0.005) 0.889 (0.002) 0.647 (0.003) 0.881 (0.002) 0.642 (0.003)
    1 0.923 (0.003) 0.707 (0.005) 0.938 (0.002) 0.717 (0.002) 0.932 (0.001) 0.711 (0.002)
    2 0.951 (0.002) 0.763 (0.005) 0.960 (0.001) 0.770 (0.002) 0.959 (0.0009) 0.765 (0.002)
    3
0.970 (0.002)
0.832 (0.005)
0.975 (0.0007)
0.840 (0.002)
0.974 (0.0005)
0.837 (0.002)

a Missing call accuracy (SEM).

b Baseline missing call accuracy (SEM).

c Allele frequency.