The Results of Block Partitioning for Different Genotyping Error Rates Based on Population P0 With α = 80% and β = 10%
Family design | Population design | ||||||
|---|---|---|---|---|---|---|---|
| Genotyping error rate | No. of SNPs | Average no. of tag SNPs using haplotype | Average no. of tag SNPs using genotype | Average no. of tag SNPs using haplotype | Average no. of tag SNPs using genotype | ||
| 0% | 103 | 31 | 30 | 31 | 30 | ||
| 0.5% | 103 | 32 | 31 | 32 | 31 | ||
| 1% | 103 | 33 | 32 | 33 | 33 | ||
| 2% | 103 | 36 | 35 | 36 | 36 | ||
| 5% | 103 | 43 | 43 | 43 | 43 | ||
[i] The SNPs with minor allele frequency >5% are used. The density of SNPs is set as one SNP per kilobase.