Base Conservation of the Intergenic Regions of the Tilapia HoxA Cluster
Intergenic fragment | % of total noncoding bases | % identified as CNS | % described in literature | % of total CNSs |
|---|---|---|---|---|
| Evx-13 | 13 | 3 | 0 | 4 |
| 13-11 | 14 | 4 | 0 | 7 |
| 11-10 | 9 | 9 | 0 | 8 |
| 10-9 | 7 | 9 | 0 | 6 |
| 9-7 | 6 | 13 | 12 | 8 |
| 7-5 | 8 | 14 | 4 | 11 |
| 5-4 | 13 | 10 | 4 | 14 |
| 4-3 | 17 | 9 | 0 | 16 |
| 3-2 | 7 | 23 | 10 | 17 |
|
2-1 |
6 |
14 |
14 |
9 |
[i] Column 1: considered intergenic fragment. Column 2: percentage of total noncoding bases of the tilapia HoxA cluster represented by the intergenic region. Column 3: percentage of the intergenic fragment identified as CNS by our analyses. Column 4: percentage of the intergenic fragment previously described in literature as involved in Hox genes regulation. Column 5: percentage of total CNSs present in this particular intergenic fragment.