Table 2.

Primate phylogenetic PCR panel results for chimpanzee AluYb elements


Name

Chimpanzee panel

Human (HeLa)

Pygmy chimpanzee

Gorilla

Orangutan

Gibbon

Siamang

Green monkey

Owl monkey
Pan1 Fixed present (AluYb8) - Polymorphic (AluYb8) - - - - × ×
Pan2 Fixed present (AluYb6) + (AluYb6) + (AluYb6) + (AluYb6) + (AluYb6) + (AluYb6) + (AluYb6) + (AluSg) ×
Pan3 Fixed present (AluYb) + (AluYb) + (AluYb) + (AluYb) + (AluY) + (AluY) + (AluY) - ×
Pan4 Fixed present (AluYb8) + (AluYb8) + (AluYb8) + (AluYb8) - - - - -
Pan5 Polymorphic (AluYb8) - - - - - - - ×
Pan6 Fixed present (AluYb8) - + (AluYb8) - - - - - -
Pan7 Fixed present (AluYb8) - + (AluYb8) - - - - - -
Pan8 Fixed present (AluYb8) - - - - - - - -
Pan9 Fixed present (AluYb8) - + (AluYb8) - - - - - -
Pan10 Fixed present (AluYb8) - + (AluYb8) - - - - - -
Pan11 Polymorphic (AluYb8) - - - - - - - ×
Pan12
Polymorphic (AluYb8)
-
-
-
-
-
-
-
-

[i] (+/-) Presence/Absence of Alu element; (×) no amplification.