Transcript-Level Comparison to Manual Annotations
No exons unpaired | 1 exon unpaired | 2 exons unpaired | No exons unpaired (coding) | 1 exon unpaired (coding) | 2 exons unpaired (coding) | |
|---|---|---|---|---|---|---|
| chr13 | 55.5% | 18.09% | 11% | 65% | 15% | 6% |
| chr14 | 52.41% | 22.08% | 8.12% | 62% | 18% | 6% |
| chr6 | 60.88% | 18.49% | 8.40% | 70% | 16% | 5% |
[i] Isoforms from either gene in the gene-pairs are paired up according to the best transcript alignment. A transcript is considered found if there is an alignment with a predicted transcript which has no better alignment with the other annotated transcripts. Also given is the percentage of the transcript pairs that have 0, 1, and 2 exons unpaired.