Summary of Comparative Homology Modeling for Protein Sequences from Nine Methanogens
Organism | Putative ORFs | Top BLAST hits to PDB | Prospect templates | Prospect model files | Models generated |
|---|---|---|---|---|---|
| M. frigidum | 1096 | 30 | 29 | 28 | 25 |
| M. burtonii | 2676 | 146 | 141 | 139 | 116 |
| M. acetivorans | 4540 | 226 | 223 | 220 | 182 |
| M. barkeri | 3145 | 180 | 175 | 173 | 142 |
| M. maripaludis | 1729 | 168 | 163 | 160 | 130 |
| M. mazei | 3371 | 210 | 206 | 203 | 168 |
| M. thermautotrophicus | 1873 | 173 | 169 | 164 | 124 |
| M. jannaschii | 1729 | 165 | 159 | 157 | 123 |
|
M. kandleri
|
1687
|
129
|
124
|
121
|
101
|