Table 1.

Summary of settings and results from various experimental designs

Orthology data
Tree reconstruction method
Organisms
HGT events
Gene loss
Vertical transfers
OFAM Average ortholog similarity 165 39,005 88,834 640,328
OFAM Gene content 165 36,385 89,951 646,791
OFAM Genome conservation 165 39,589 84,630 635,056
STRING
Gene content
98
9968
32,943
288,225