Generalized state types by region and bounding features
Type | Region | 5′ Boundary | 3′ Boundary |
|---|---|---|---|
| ESNGL | CDS | Start codon | Stop codon |
| EINIT | CDS | Start codon | Donor |
| EINT | CDS | Acceptor | Donor |
| ETERM | CDS | Acceptor | Stop codon |
| E5′ SNGL | 5′ UTR | TSS | Start codon |
| E5′ FIRST | 5′ UTR | TSS | Donor |
| E5′ INTERNL | 5′ UTR | Acceptor | Donor |
| E5′ LAST | 5′ UTR | Acceptor | Start codon |