Size, location, and composition of large nuclear insertions of organelle DNA in Arabidopsis and rice
Integrant | Size (bp) | Pseudo-chromosomal location | Type and number of distinct fragments contained | ||
|---|---|---|---|---|---|
| Long continuous integrants | |||||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(131_{p}^{Os10}\) \end{document} | 130,669 | 10,286,223-10,416,891 | 1 NUPT | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(33_{p}^{Os10}\) \end{document} | 32,974 | 19,948,780-19,981,753 | 2 NUPTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(6.1_{p}^{Os1}\) \end{document} | 6280 | 20,216,340-20,222,619 | 1 NUPT | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(5_{p}^{Os4}\) \end{document} | 5137 | 18,622,839-18,627,975 | 1 NUPT | ||
| Complex integrants containing organelle DNA from one organelle | |||||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(121_{p}^{Os4}\) \end{document} | 120,625 | 8,902,464-9,023,088 | 19 NUPTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(24_{p}^{Os4}\) \end{document} | 23,869 | 23,134,492-23,158,360 | 13 NUPTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(271_{m}^{At2}\) \end{document} | 270,815 | 3,238,037-3,508,851 | 16 NUMTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(27_{m}^{Os4}\) \end{document} | 26,730 | 32,368,959-32,395,688 | 5 NUMTs | ||
| Complex integrants with both types of organelle DNA | |||||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(92_{pm}^{Os1}\) \end{document} | 91,974 | 33,276,310-33,368,283 | 36 NUPTs; 11 NUMTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(18_{pm}^{Os1}\) \end{document} | 18,463 | 38,837,181-38,855,643 | 8 NUPTs; 87 NUMTs; 1 ambiguous fragment | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(12_{pm}^{Os1}\) \end{document} | 12,393 | 18,487,740-18,500,132 | 2 NUPTs; 27 NUMTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(6.2_{pm}^{Os1}\) \end{document} | 6304 | 34,148,238-34,154,541 | 3 NUPTs; 81 NUMTs | ||
| [TeX:] \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(3_{pm}^{Os10}\) \end{document} | 2959 | 7,678,963-7,681,921 | 2 NUPTs; 29 NUMTs | ||
| Total | 749,192 | — | 88 NUPTs, 256 NUMTs, 1 ambiguous fragment | ||
[i] (NUPT) Nuclear plastid DNA; (NUMT) nuclear mitochondrial DNA.