Summary of In Silico Analysis of the S/MAR Domain of 20p12 Neocentromere
S/MAR domain | Non-S/MAR domain | p-value | |
|---|---|---|---|
| AT content | 60.9% | 60.7% | 0.646 |
| Poly(A) tracts | 1802 | 1790 | 0.840 |
| MarWiz | 3.7 | 3.5 | 0.511 |
| Smartest | 10.4 | 9.1 | 0.630 |
|
ChrClass
|
17.7
|
16.9
|
0.777
|
[i] To facilitate statistical analysis, AT content was calculated for the whole region, whereas the frequency of poly(A) tracts and S/MAR predictions, using MarWiz, Smartest, and ChrClass were calculated per 100 kb. P-values from t-tests comparing the S/MAR-enhanced and non-S/MAR-enhanced domains are given.