Percent Intronic Conservation as a Function of the Distance From the Splice Sitea
Upstream introns | Downstream introns | |||||
|---|---|---|---|---|---|---|
|
Distance from splice site (bp)
|
Constitutively spliced
|
Alternatively spliced
|
Constitutively spliced
|
Alternatively spliced
| ||
| 1-6b | 81.6 | 93.3 | 87.4 | 95.1 | ||
| 7-30 | 63.1 | 86.7 | 55.1 | 75.9 | ||
| 31-60 | 54.9 | 76.0 | 52.0 | 70.1 | ||
|
61-90
|
50.5
|
65.8
|
49.0
|
65.6
| ||
a Shown are the average identity levels in windows of 30 bases
b Conservation for the nucleotides that define the splice site (intronic bases 1-6) was calculated separately