Summary of EST-Derived SNPs
Accession | ESTs | Clustered ESTs | Mapped ESTsa | High-quality bp | SNPs | SNP/bp sequenced | InDelsb |
|---|---|---|---|---|---|---|---|
| Ak-2 | 1,248 | 746 | 620 | 311,040 | 878 | 1:354 | 8 |
| C24 | 2,719 | 1,193 | 916 | 398,384 | 1,137 | 1:350 | 5 |
| Cvi-0 | 1,774 | 877 | 685 | 322,322 | 1,345 | 1:240 | 4 |
| Ei-2 | 2,088 | 944 | 717 | 322,698 | 861 | 1:386 | 2 |
| Ler | 1,248 | 712 | 590 | 285,822 | 840 | 1:340 | 5 |
| Nd-1 | 1,629 | 817 | 648 | 291,330 | 839 | 1:347 | 1 |
|
Total |
10,706 |
5,289 |
4,176 |
1,941,596 |
4,327c
|
1:336 |
18c
|
a Mapped ESTs refer to ESTs that could be aligned with annotated genes (see text).
b Only InDels in ORFs were counted (see text).
c Due to redundancy (e.g., intermediate frequency polymorphisms), the overall number of SNPs and InDels is lower than the sum of all accessions.