Tag Mapping Accuracy Using Conceptual Transcripts Compared With Other Available Sequences
Test tags assigned to genes by mapping to... | Tags mapped unambiguously | Unambiguously mapped tags correctly assigned to genes |
|---|---|---|
| Full-length cDNAs (5606) | 99% | 100% |
| EST sequences (204,380) | 94% | 70% |
| Predicted protein coding sequences from genomic annotation (13,489) | 97% | 48% |
| Conceptual transcripts constructed from predicted protein coding sequences from genomic annotation, UTRs estimated (13,489) | 96% | 81% |
| Conceptual transcripts constructed from predicted protein coding sequences from genomic annotation, UTRs derived from EST data or estimated if ESTs unavailable (13,489) | 96% | 85% |
|
Conceptual transcripts constructed from predicted protein coding sequences from genomic annotation, UTRs derived from EST and cDNA data or estimated if ESTs and cDNAs unavailable (13,489) |
96% |
93% |