Markup | Genome Research

Table 9.

Percent Homology Between 3′ and 5′ Splice Sites

A	22	33	30	26	38	30	39	38	23	30	82	88	^	49	37	39	18	20	38	31	30	14	30	37	16
B	24	32	30	24	27	31	28	34	35	20	63	76	^	46	41	31	25	17	25	20	24	28	27	26	25
C	26	27	27	27	29	29	28	31	27	23	56	60	^	31	36	27	27	21	25	25	26	26	25	26	26

[i] The table shows the average percent of matching bases for 12 nucleotides on either side of the splice site, which is shown by the caret (^). (A) Introns unique to C. briggsae; (B) introns unique to C. elegans; (C) all C. elegans introns.

A	22	33	30	26	38	30	39	38	23	30	82	88	^	49	37	39	18	20	38	31	30	14	30	37	16
B	24	32	30	24	27	31	28	34	35	20	63	76	^	46	41	31	25	17	25	20	24	28	27	26	25
C	26	27	27	27	29	29	28	31	27	23	56	60	^	31	36	27	27	21	25	25	26	26	25	26	26

A	22	33	30	26	38	30	39	38	23	30	82	88	^	49	37	39	18	20	38	31	30	14	30	37	16
B	24	32	30	24	27	31	28	34	35	20	63	76	^	46	41	31	25	17	25	20	24	28	27	26	25
C	26	27	27	27	29	29	28	31	27	23	56	60	^	31	36	27	27	21	25	25	26	26	25	26	26

A	22	33	30	26	38	30	39	38	23	30	82	88	^	49	37	39	18	20	38	31	30	14	30	37	16
B	24	32	30	24	27	31	28	34	35	20	63	76	^	46	41	31	25	17	25	20	24	28	27	26	25
C	26	27	27	27	29	29	28	31	27	23	56	60	^	31	36	27	27	21	25	25	26	26	25	26	26