Alternative Splicing Forms Predicted
| Strand | Annotations | Begin | End | Genie | Genie EST | Genie ESTHOM | Other gene finder hits | Gene name | Comments |
| F | std3 | 159,578 | 163,527 | X | 4 | DS01368.1 | EST alignment verifies last additional intron | ||
| Genie | 159,578 | 164,417 | X | X | X | 5 | |||
| R | std3 | 325,240 | 326,379 | MtPolB | additional first exon | ||||
| Genie | 325,240 | 326,822 | X | X | X | 3 | |||
| R | std3 | 1,334,780 | 1,338,785 | X | 5 | DS03431.1 | missed third exon, (EST verified) | ||
| Genie | 1,334,780 | 1,338,785 | X | X | 1 | ||||
| R | std3 | 1,371,813 | 1,372,351 | 2 | Mst35Bb | longer first exon and shorter last exon | |||
| Genie | 1,371,868 | 1,372,213 | X | X | 3 | ||||
| F | std3 | 1,493,680 | 1,496,198 | 1 | DS00929.1 | wrong first exon and EST intron in second exon | |||
| Genie | 1,495,484 | 1,496,198 | X | X | X | 4 |
[i] Genes in std3 that might have an alternative gene structure as predicted by Genie and with similar predictions from other gene finders are listed.