Translated ORFs Identified in an Unbiased Search of Yeast Proteome
| Proposed ORF designation | Location | Peptide identified | CAI | Chromosome | Size (A.A.) |
| YBR221W-A | intergenic | K.RISLGMINTVVSLDR.- | 0.103 | Chr II: 666497-666598 | 23 |
| YBR196C-A | intergenic | V.VLSKEKILLKKAYYAK.T | 0.087 | Chr II: 614589-614488 | 34 |
| YBR121C-A | within YBR121C different frame | F.KKLVLLNQLSRQLVKQ.L | 0.116 | Chr II: 482443-482288 | 52 |
| YBL039C-A | within YBL039C different frame | N.RWLTFTMLILLIT.S | 0.103 | Chr II: 144994-144914 | 27 |
| YDR003W-A | intergenic (3′ of YDR003W) | M.TCGIENSYKSAEK.K | 0.131 | Chr IV: 454778-454897 | 40 |
| YDR118W-A | within YDR118W/APC4 different frame | K.RIPSVSKR.K | 0.106 | Chr IV: 687761-687874 | 38 |
| YDR371C-A | opposite | -.MGSMILDITGNSM.S | 0.073 | Chr IV: 1219602-1219501 | 34 |
| Multiple locations | intergenic | V.DFYSNIINKNLR.L | 0.104 | Chr V: 443764-443633 | 44 |
| YER090C-A | opposite | F.LFLARNNEHSHKK.Y | 0.17 | Chr V: 338407-338321 | 29 |
| YFR009W-A | within YFR009W different frame | T.KWFTESTCKSLLTNTD.T | 0.095 | Chr VI: 163868-164122 | 85 |
| YFR010W-A | opposite of YFR011c | L.FVTIQWLALIGQKTLSQ.F | 0.116 | Chr VI: 166720-166905 | 62 |
| YGL041W-A | opposite of YGL042C | K.KLVNLDGTSANEENTMKPWQMK.I | 0.109 | Chr VII: 419038-419283 | 82 |
| K.SGIQLGPEQLAPLMTVLGLEK.K | |||||
| YGR035W-A | intergenic | P.EAPLIIRGK.G | 0.095 | Chr VII: 557559-557777 | 73 |
| YGL210W-A | intergenic | K.STAHTQSSGSPIKR.S | 0.121 | Chr VIII: 93078-93305 | 76 |
| YGL014C-A | opposite of YGL014W | R.RRAISELRILR.N | 0.109 | Chr VII: 466394-466236 | 53 |
| YHR073C-A | opposite of YHR073W | K.YLGSTSCPLLR.J | 0.109 | Chr VIII: 245503-245426 | 26 |
| YHL015W-A | intergenic | L.REPLYLANLKIKVHIYRMKR.- | 0.253 | Chr VIII: 74695-74775 | 27 |
| YHR073W-A | within YHR073W different frame | G.KRDHILHCPLAAY.S | 0.065 | Chr VIII: 242869-243042 | 58 |
| YJL197C-A | opposite of YJL197W | K.KDLSLSVTLIDVYC.S | 0.08 | Chr X: 66085-65807 | 93 |
| YKL145W-A | within YKL145W different frame | -.MGHLVLVR.H | 0.036 | Chr XI: 174960-175049 | 30 |
| YKL100W-A | opposite of YKL100C | L.PDVIFVAHR.N | 0.109 | Chr XI: 253802-253888 | 29 |
| YLR163W-A | opposite of YLR163C | Y.SLSLSIALLSKTDLVK.I | 0.065 | Chr XII: 492814-492924 | 37 |
| YLR363W-A[i] | YLR262W-A | K.SSSLTETTERLVASK.V | 0.281 | Chr XII: 853459-853713 | 85 |
| YLR364C-A | opposite of YLR366W | I.RVFIGSLPMLDLKNR.V | 0.086 | Chr XII: 855643-855524 | 40 |
| YMR013C-A | YMR013C/SEC59 different frame | R.GPLLPLIYLINK.S | 0.085 | Chr XIII: 296619-296473 | 49 |
| YOR293C-A | intergenic | L.LFLNHVVR.R | 0.069 | Chr XV: 868145-867996 | 50 |
| YOL083C-A | opposite of YOL083W | R.VILITHLNV.M | 0.144 | Chr XV: 16660-166463 | 46 |
| YPR160W-A | within GPHI/YPR160W different frame | S.MVSLLKRLLTVTRWK.L | 0.134 | Chr XVI: 861929-862006 | 26 |
[i] Identified by homology (Blandin et al. 2000).