Table 5.

GO Function Prediction Coverage Summary for SWISS-PROT as a Function of the Domain Database and Use of IEA Annotation

Rule group[i] Number of entries with prediction(s)b Number of predictionsc Average number of predictions per entryd Average depth of predictionse
ProDom-NoIEA38520 (39%)1970685.13.6
ProDom-All48960 (50%)2645665.43.8
CDD-NoIEA40530 (41%)1782524.43.3
CDD-All47076 (48%)2169764.63.5
UNION-NoIEA47105 (48%)2489435.33.6
UNION-All55287 (56%)3101805.63.8

[i] Domain database and type of GO associations used to build rules. bNumber and percent of entries for which a prediction was made. cTotal number of GO function terms predicted. dAverage number of GO function terms predicted per entry. eAverage number of depth of predicted GO functions terms.