Table 5.

Example Values of the Errors Fixed Formula

Old consNew readNew uniqueNew redundant
51011.010.6
52021.220.8
101016.213.1
102027.523.9
201027.523.9
202039.226.4
301037.634.0
302049.536.5
401047.644.0
402059.646.6

[i] Old cons: Quality of the consensus base. New read: Quality of the corresponding base of the Autofinish candidate read. New unique: The resulting consensus quality value if the candidate read has a different chemistry or strand from any existing read aligned at that base position. New redundant: the resulting consensus quality value if the candidate read has the same strand and chemistry as some existing read aligned at that base position.