Duplication Junction PCR Oligonucleotides
| Pair | Name | Sequence | Accession no. | Coordinate | Size (bp) |
| 1 | 2H8-7 | CTGAGTAGAAGCATCTAGGGGGTC | D87003 | 37268-291 | 246 |
| 2H8-8 | GGCAGAAAAGGAGCAAGGATTTAC | D87003 | 37514-491 | ||
| 2 | 2H8-13 | TAACA(AG)GCACTTACAATTCAAGGC | D87003 * | 27301-324 | 245 |
| 2H8-14 | GACCCTGCCCCTGGTTTTTCTC | D87003 * | 27546-525 | ||
| 3 | 180G2-11 | TCCTCAAATAAACGGGTACAGAAG | AC002402 | 58541-564 | 240 |
| 180G2-12 | TCCCAGAAAGTGTTAGCATTACAG | AC002402 | 58781-758 | ||
| 4 | 17E1-5 | GCAATGGACCTGCCTTGGTCCTGC | AC002041 | 172739-762 | 481 |
| 17E1-7 | AAAGCATGTGGAGGCTGGGCGTGG | AC002041 | 173220-197 | ||
| 5 | 17E1BP-1 | CCATGGGGCCTGCTGGATACTCAC | AC002041 | 168320-343 | 457 |
| 17E1BP-2 | CCCTGTACAGTGCTACCAACCAG | AC002041 | 168777-755 | ||
| 6 | 21NF-47 | AGTACGCTTCAAAAATCTTGGCAC | AC004527 | 47957-980 | 613 |
| 21NF-48 | TACGATAGCCCTGACCCTGACTTG | AC004527 | 48570-547 | ||
| 7 | 21NF-3 | CATGATAAGGATGCCCACTGTCAC | AC004527 | 53659-682 | 472 |
| 21NF-4 | CCTTCTTTAAGGTGCGAACGGAGG | AC004527 | 54131-108 |