Markup | Genome Research

Table 3.

Summary of Statistics

Chr.		Human gene map		HMGM (skeletal muscle)		Library 500 (skeletal muscle)		Library 24 (skeletal muscle)		Library 272 (skeletal muscle)		Library 245 (uterus)		Library 241 (heart)
Chr.		Human gene map		obs	exp	χ²	obs	exp	χ²	obs	exp	χ²	obs	exp	χ²	obs	exp	χ²	obs	exp	χ²
1	2162	115	116.3	0.0	34	37.9	0.4	58	53.3	0.4	59	55.2	0.3	318	306.7	0.4	44	51.6	1.1
2	1600	79	86.1	0.6	19	28.0	2.9	38	39.4	0.1	42	40.9	0.0	211	227.0	1.1	34	38.2	0.5
3	1388	82	74.7	0.7	21	24.3	0.5	38	34.2	0.4	43	35.5	1.6	187	196.9	0.5	37	33.1	0.5
4	1013	36	54.5	0.3	9	17.7	4.3	22	25.0	0.4	15	25.9	4.6	122	143.7	3.3	21	24.2	0.4
5	974	47	52.4	0.6	10	17.1	2.9	29	24.0	1.0	20	24.9	1.0	140	138.2	0.0	29	23.2	1.4
6	1034	50	55.6	0.6	18	18.1	0.0	26	25.5	0.0	16	26.4	4.1	150	146.7	0.1	17	24.7	2.4
7	1111	40	59.8	0.3	11	19.5	3.7	19	27.4	2.6	25	28.4	0.4	140	157.6	2.0	25	26.5	0.1
8	865	49	46.5	0.1	13	15.2	0.3	19	21.3	0.3	23	22.1	0.0	106	122.7	2.3	16	20.6	1.0
9	852	40	45.8	0.7	20	14.9	1.7	17	21.0	0.8	14	21.8	2.8	116	120.9	0.2	22	20.3	0.1
10	887	51	47.7	0.2	14	15.5	0.2	23	21.9	0.1	22	22.7	0.0	130	125.8	0.1	18	21.2	0.5
11	1344	63	72.3	1.2	28	23.5	0.8	19	33.1	6.0	27	34.3	1.6	171	190.6	2.0	34	32.1	0.1
12	958	51	51.5	0.0	15	16.8	0.2	25	23.6	0.1	24	24.5	0.0	144	135.9	0.5	28	22.9	1.2
13	377	16	20.3	0.9	5	6.6	0.4	9	9.3	0.0	4	9.6	3.3	52	53.5	0.0	3	9.0	4.0
14	713	40	38.4	0.1	11	12.5	0.2	21	17.6	0.7	21	18.2	0.4	108	101.1	0.5	22	17.0	1.5
15	626	38	33.7	0.6	17	11.0	3.3	20	15.4	1.4	19	16.0	0.6	94	88.8	0.3	17	14.9	0.3
16	573	41	30.8	3.4	10	10.0	0.0	21	14.1	3.3	21	14.6	2.8	93	81.3	1.7	13	13.7	0.0
17	790	62	42.5	8.9**	22	13.8	4.8*	21	19.5	0.1	30	20.2	4.8*	145	112.1	9.7**	27	18.8	3.5
18	415	17	22.3	1.3	8	7.3	0.1	7	10.2	1.0	11	10.6	0.0	41	58.9	5.4	5	9.9	2.4
19	644	54	34.6	10.8***	28	11.3	24.8***	23	15.9	3.2	27	16.5	6.8**	107	91.3	2.7	17	15.4	0.2
20	567	35	30.5	0.7	14	9.9	1.7	16	14.0	0.3	11	14.5	0.8	88	80.4	0.7	12	13.5	0.2
21	163	7	8.8	0.4	1	2.9	1.2	2	4.0	1.0	5	4.2	0.2	28	23.1	1.0	4	3.9	0.0
22	432	24	23.2	0.0	10	7.6	0.8	10	10.7	0.0	7	11.0	1.5	61	61.3	0.0	15	10.3	2.1
X	548	41	29.5	4.5*	13	9.6	1.2	11	13.5	0.5	26	14.0	10.3***	90	77.7	1.9	18	13.1	1.9
	20036	1078	1078.0	49.0	351	351.0	56.3	494	494.0	23.6	512.0	512	47.7	2842	2842.0	36.5	478	478.0	25.3

[i] First column: The number of genes by chromosome, reported in The Human Gene Map database. For each library, the number of observed data, the expectations and the associated χ² are reported, both by chromosome (in columns) and for the total distribution (in the bottom line). Highly significant values of χ² for single chromosomes (df = 1) are indicated, respectively, with one (P = 0.05), two (P = 0.01), or three (P = 0.001) asterisks (*). The statistically significant (P < 0.002) distributions are reported in bold. Library no. 500, no. 272, and no. 24 are from human adult skeletal muscle. Library no. 245 is from human uterus, and library no. 241 from adult human heart. HMGM corresponds to the set obtained by pooling the three skeletal muscle libraries, including the HSPDs.