Table 3.

Summary of local scan for ASE

725tbl3

[i] A total of 18,813 genes, containing 55,401 transcribed SNPs, were tested against 134,983 SNPs.

[ii] aThe q-value thresholds for ASE association.

[iii] bThe number of genes that were significant for ASE association and which were among the 3,365 genes significant at FDR < 0.05 in local scan of expression level.

[iv] cThe fold enrichment for cis regulated genes among locally regulated genes.

[v] dP-value of χ2-test for the overlap between genes with local regulatory variation and genes with cis regulatory variation.