Table 3.

The Osmotic Stress Response Partitions into Distinct Classes of Cellular Function

Cluster pvalue GenProt designation Description Observed (F∩C) Expected (F∩C)
07.06E-055.5Adaptation to stress124.9
05.38E-045.5.1Osmotic pressure104.2
18.99E-051.7.34Peptidoglycan (murein) turnover, recycling30.1
11.93E-046Cell structure61.5
24.32E-031.6Macromolecules (cellular constituent) biosynthesis62.0
25.03E-031.1.1Carbon compounds115.3
29.11E-036.4Flagellum41.1
29.11E-031.6.12Flagella41.1
29.11E-035.3Motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)41.1
29.23E-031.1Carbon utilization126.5
39.29E-041.7.1Unassigned reversible reactions30.3
48.13E-061.5Building block biosynthesis134.2
44.41E-041.5.1Amino acids92.9
57.06E-044.SSubstrate114.4
58.77E-044Transport125.2
52.31E-034.4.A.6The PTS Mannose-Fructose-Sorbose (Man) family30.4
56.45E-031.1Carbon utilization94.0
56.70E-031.1.1Carbon compounds83.3
57.34E-034.4Group translocators41.0
57.34E-034.4.APhosphotransferase systems (PEP-dependent PTS)41.0

[i] The six clusters were screened using a hypergeometric test measuring statistical enrichment for functional categories from the GenProtEC Escherichia coli database. Observed (F∩C) denotes the number of genes in the specified functional category that are found in the cluster. Expected (F∩C) denotes the number of genes expected by chance to lie within the cluster. P values below 0.01 were deemed significant using Bonferroni correction for multiple hypothesis testing phosphoenolpyruvate (PEP).