Table 3.

Shotgun Statistics of the Five BACs Selected for the Autofinish-Hybrid versus Human-Only Competition

ProjectGenBank accession no.Q20 coverageSize in kB#Shotgun reads# Contigs after shotgun phaseAvg. # Q20 bases per read
BAC218 AC009362 155193424325
BAC383 AC010656 139197912353
BAC270 AC009517 14127667359
BAC366 AC009358 11×18554555377
BAC422 AC009332 14×14853798380

[i] Q20Coverage=RDs×Q20lengthBAClength where RDs is the number of shotgun reads, Q20length is the average number of bases in a read which are PHRED quality 20 or greater, and BAClength is the size of the BAC in base pairs.