Table 3.

SSAHA Searches for Different Values of k

k 90% 95% 100%
Thash Tsearch Thash Tsearch Thash Tsearch
10824.0s102.5s842.4s128.8s868.5s389.5s
11798.3s26.3s810.5s36.1s808.8s199.1s
12952.2s7.3s969.9s11.0s961.2s119.0s
13850.8s2.2s859.1s4.5s851.4s78.7s
14914.1s0.9s932.0s2.5s927.1s51.6s
15996.0s0.1s1015.5s1.7s999.2s35.4s