Table 3.

Classification of the Observed CDS Splits

cDNA group Nonsense mutation Insertion (GT-AG)[i] Deletion (GT-AG)[i] Frame-shift mutation None[ii] Others[iii] Total
KG1/NFL03 (0)6 (2)1110131
Brain/Ch104 (4)1 (0)13110
Brain/LCDS331 (19)10 (2)1820890
Total338 (23)17 (4)303310131

[i] Numbers in parentheses are the numbers of insertions or deletions having possible GT-AG splicing boundaries.

[ii] Number of cloned cDNA sequences were identical to those of the main RT-PCR products at the site triggering an alert by GeneMark analysis.

[iii] Number of the sites including multiple causes for single CDS splits.

[iv] Note: numbers of experimentally examined sites are given in each cDNA class. KIAA0302 and KIAA0324 were omitted from these data because they were found to contain sequencing errors.