Markup | Genome Research

Table 2.

Average Number of Chromosome Breaks Between Consecutive Markers and the Average of the Logarithm of Two-Point Likelihood for the Maps with Breakage Probabilities Computed as in Extended TSP + MLE

Chr		OCB/no. of markers		Log [L(M)]/no. markers
Chr		RHMAPPER	CONCORDE	RHMAPPER	CONCORDE
1	?	2.91	?	−4.41
2	4.96	2.88	−6.24	−4.40
3	5.18	3.13	−6.55	−4.73
4	5.52	2.96	−6.77	−4.59
5	5.17	3.09	−6.67	−4.69
6	4.76	3.11	−6.28	−4.72
7	5.91	3.69	−7.16	−5.29
8	5.34	3.09	−6.73	−4.70
9	4.73	3.16	−6.21	−4.79
10	5.35	3.47	−6.73	−5.08
11	5.79	3.24	−7.00	−4.84
12	5.31	3.32	−6.86	−5.05
13	4.58	3.17	−5.96	−4.79
14	4.04	2.93	−5.69	−4.57
15	4.70	3.76	−6.36	−5.39
16	5.04	3.49	−6.47	−5.12
17	4.39	3.69	−6.07	−5.50
18	6.10	3.88	−7.52	−5.54
19	4.95	3.23	−6.59	−4.88
20	4.87	3.70	−6.43	−5.53
21	3.79	3.36	−5.73	−5.16
22	4.21	3.41	−6.24	−5.20
X	4.35	2.80	−5.52	−4.22

[i] (Chr) chromosome number; (RHMAPPER) maps computed by us using RHMAPPER for G3 panel data; (CONCORDE) maps computed using CONCORDE for G3 panel data.