Table 2.

Sequence and Position of PCR Primers

Primer Position Sequence (5′ to 3′)
UNI-33TTTTTTTTTTTTTTTGTTTGTTGTGGGGGGGTT
UNI-17TTTTTGTTTGTTGTGGG
Op1− +94TGCTGGACTGGGTGCTGTCCTCATAGC
Op2− +78TCATAGCTGTCCTGCGGATGGCG
Op1+ +254CCAGTAGCTGGGATTACAGG
Op2+ −151TGGGAGGAGGAGGTCTAAGTCC
Up(A−)−130GCTCCCAAATCCTACACCATC
Up(B−)−233AGAGGGATTTGCTGGAAAC
Up(C−)−2350AGACAGTAGACAGGTGGGTGCC
MW− −114AAATCCTACACCATCTGATCTC
MW+ −865AGGTGATCCGGGAATAGTAAG
NWMLCR− −360CTGTCCAGTGCCCGCCTTTGG
MarUp(A+)−627GAAGGAGCTGCAGCTCATGG
MarLCR(C+)−2896CCTCAGAATTGCTTATCTCCCTC
MarLCR(D−)−1015TGCCTCCTTTTGGGTTTGTTCC
MarLCR(D+)−2221TTTGTTTATTCAATCATCCG
MarLCR(E−)−1257GTGCTAGGTGCCAAGCTAGG
MarLCR(E+)−1900CGATGGACACAGTTTGCTTCC
LCR(C+)−3484GACTTGATCTTCTGTTAGCCCTAATC
AL− −380GGATGATGAATCTGCCCAGAG
AL+ −3225CGAAGGTGCAGAACCTACCG

[i] Except for Op1+, Op1− and Op2−, which are based on the human MW and LW sequences, and AL−, which is based on the howler monkey sequence, the nucleotide numbering system refers to the marmoset X-linked opsin gene, where +1 would be the first base of the coding sequence.