Table 2.

Sequence and Position of PCR Primers

Primer Position Sequence (5′ to 3′)
UNI-33TTTTTTTTTTTTTTTGTTTGTTGTGGGGGGGTT
UNI-17TTTTTGTTTGTTGTGGG
Op1 +94TGCTGGACTGGGTGCTGTCCTCATAGC
Op2 +78TCATAGCTGTCCTGCGGATGGCG
Op1+ +254CCAGTAGCTGGGATTACAGG
Op2+ −151TGGGAGGAGGAGGTCTAAGTCC
Up(A)−130GCTCCCAAATCCTACACCATC
Up(B)−233AGAGGGATTTGCTGGAAAC
Up(C)−2350AGACAGTAGACAGGTGGGTGCC
MW −114AAATCCTACACCATCTGATCTC
MW+ −865AGGTGATCCGGGAATAGTAAG
NWMLCR −360CTGTCCAGTGCCCGCCTTTGG
MarUp(A+)−627GAAGGAGCTGCAGCTCATGG
MarLCR(C+)−2896CCTCAGAATTGCTTATCTCCCTC
MarLCR(D)−1015TGCCTCCTTTTGGGTTTGTTCC
MarLCR(D+)−2221TTTGTTTATTCAATCATCCG
MarLCR(E)−1257GTGCTAGGTGCCAAGCTAGG
MarLCR(E+)−1900CGATGGACACAGTTTGCTTCC
LCR(C+)−3484GACTTGATCTTCTGTTAGCCCTAATC
AL −380GGATGATGAATCTGCCCAGAG
AL+ −3225CGAAGGTGCAGAACCTACCG

[i] Except for Op1+, Op1 and Op2, which are based on the human MW and LW sequences, and AL, which is based on the howler monkey sequence, the nucleotide numbering system refers to the marmoset X-linked opsin gene, where +1 would be the first base of the coding sequence.