Fold Assignment in Complete Proteomes
| Species | No. of proteins | Automatically predicted | Total predicted[ii] | False negatives[iii] | False positives[iv] | No. of recognized folds | |||
| M. genitalium | 467 | 159 | 182 | 39.0% | 24 | 13.2% | 1 | 0.6% | 81 |
| M. pneumoniae | 677 | 173 | 197 | 29.1% | 26 | 13.2% | 2 | 1.2% | 84 |
| B. burgdorferi | 1,256 | 216 | 241 | 19.2% | 32 | 13.3% | 7 | 3.2% | 94 |
| A. aeolicus | 1,521 | 481 | 530 | 34.8% | 53 | 10.0% | 4 | 0.8% | 108 |
| H. pylori | 1,565 | 343 | 392 | 25.0% | 50 | 12.8% | 1 | 0.3% | 112 |
| H. influenzae | 1,717 | 506 | 555 | 32.3% | 53 | 9.5% | 4 | 0.8% | 144 |
| Synechocystissp. | 3,169 | 826 | 894 | 28.2% | 72 | 8.1% | 4 | 0.5% | 151 |
| B. subtilis | 4,099 | 1021 | 1124 | 27.4% | 115 | 10.2% | 12 | 1.2% | 165 |
| E. coli | 4,289 | 1104 | 1212 | 28.3% | 136 | 11.2% | 28 | 2.5% | 175 |
| M. jannaschii | 1,770 | 389 | 439 | 24.8% | 56 | 12.8% | 6 | 1.5% | 98 |
| M. thermoautotrophicum | 1,893 | 459 | 509 | 26.9% | 54 | 10.6% | 4 | 0.9% | 103 |
| A. fulgidus | 2,407 | 608 | 679 | 28.2% | 75 | 11.0% | 4 | 0.7% | 112 |
| S. cerevisiae | 6,529 | 1462 | 1575 | 24.1% | 148 | 9.4% | 35 | 2.4% | 165 |
| C. elegans | 13,743 | 2831 | 2831 | 20.6% | N/A | N/A | N/A | N/A | 172 |
[i] (N/A) Not applicable.
[ii] Percentage of total prediction is indicated relative to the proteome size.
[iii] Percentage of false negatives is indicated relative to total prediction figures
[iv] Percentage of false positives is indicated relative to automatic prediction figures.