Percent Identical Amino Acid Residues for Ty1 and Ty2
| Ty1 | Ty1 without Ty1‘ | Ty2 | Total | |
| GAG | 326/441 = 73.9% (32 elements) | 415/441 = 94.1% (29 elements) | 410/439 = 93.4% (13 elements) | 181/443 = 40.9% (45 elements) |
| POL | 1194/1324 = 90.2% (31 elements) | 1199/1324 = 90.6% (28 elements) | 1292/1342 = 96.3% (12 elements) | 932/1351 = 69.0% (43 elements) |
| Total coding information | (326 + 1194)/ (441 + 1324) = 86.1% | (415 + 1199)/ (441 + 1324) = 91.4% | (410 + 1292)/ (439 + 1342) = 95.6% | 1113/1794 = 62.0% |
[i] Amino acid sequences for multiple elements were aligned (the number of sequences analyzed is given in parenthesis). Percentages reflect the number of identical residues divided by the total residues.