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Table 2.

Comprehensive identification of fusion transcripts by RT-PCR in eight breast cancer genomes

[i] We tested total 128 fusions whose 5′ fusion partner is a RefSeq gene but 3′ partner is either a RefSeq gene (FG^R) or a non-RefSeq annotated transcript (3′T-E^R). Fusion points where the paired genomic regions have high sequence homology with each other as indicated by high pairwise BLAST scores were excluded from the validation.