Table 2.

Genomic regions showing high FST clustering

804tbl2

[i] aRegions were identified from a visual inspection of a plot of the top 10,000 FST values against genomic position. Reported SNP and FST values are the highest observed in that cluster.

[ii] bNCBI 36 build of the human genome.

[iii] cGenes within 250 kb either side of the peak SNP are listed. Where the SNP falls within a gene, the gene symbol is indicated in bold.

[iv] dA further 59 genes within this region are in proximity (±250 kb) to the peak SNP: AIF1, APOM, ATP6V1G2, BAT1, BAT2, BAT3, BAT4, BAT5, C2, C4A, C4B, C6orf21, C6orf25, C6orf26, C6orf27, C6orf47, C6orf48, CCHCR1, CDSN, CFB, CLIC1, CSNK2B, CYP21A2, DDAH2, DOM3Z, EHMT2, HCG27, HCP5, HLA-B, HLA-C, HSPA1A, HSPA1B, HSPA1L, LSM2, LST1, LTA, LTB, LY6G5B, LY6G5C, LY6G6C, LY6G6D, MCCD1, MICA, MICB, MSH5, NCR3, NEU1, NFKBIL1, POU5F1, PSORS1C2, RDBP, SKIV2L, SLC44A4, STK19, TCF19, TNF, TNXB, VARS, ZBTB12.