Coverage of Motif Databases as a Function of Usage of IEA Protein-Function Associations
| Rule seta | Number of domains with a ruleb | Coveragec |
| ProDom-NoIEA | 10724 | 11% |
| CDD-NoIEA | 1396 | 38% |
| LOAD | 27 | 49% |
| Smart | 353 | 59% |
| Pfam | 1016 | 34% |
| ProDom-All | 17504 | 18% |
| CDD-All | 1792 | 52% |
| LOAD | 31 | 59% |
| Smart | 417 | 75% |
| Pfam | 1344 | 47% |
[i] LOAD, Smart, and Pfam are component databases in CDD. We only considered those ProDom domains derived from at least two sequences.aDomain (sub)database and GO associations used to build rules. bTotal number of domains with at least one rule.cPercent of (sub)database for which a rule was created.