TE Elements Identified in theTetraodon Genome
| Description | Method | Acc. Nr. | P. value | Fugu | Family | % DNA |
| F. rubripes SUSHI retrotransposon | NUCX | Gb:AF030881 | 8.5e-99 | Y | Class I Ty3/gypsy | 0.163% |
| B. mori MAG retrotransposon | SPTR | Pir:S08505 | 7.2e-52 | N | ||
| D. melanogaster retrotransposon 17.6 | SPTR | Sw:P04323 | 1.4e-31 | N | ||
| D. melanogaster ZAM retrotransposon | NUCX | gb:AJ000387 | 2.9e-47 | N | ||
| D. ananassae Tom retrotransposon | SPTR | pir:S34639 | 3.1e-49 | Y | ||
| C. elegans CER1 retrotransposon | SPTR | sptr:Q17329 | 6.1e-14 | N | ||
| Z. mays Gypsy-like retrotransposon Reina | NUCX | gb:U69258 | 2.3e-47 | N | ||
| A. comosus Dea1 retrotransposon | NUCX | gb:Y12432 | 1.3e-59 | N | ||
| C. elegans gypsy like retrotransposon | SPTR | sptr:O45092 | 3.3e-18 | Y | ||
| S. tuberosum reverse transcriptase | SPTR | sptr:O64387 | 3.2e-14 | N | Class I Ty1/copia | 0.067% |
| N. tabacum Ttol retrotransposon | SPTR | gp:TOBAA_1 | 1.5e-48 | N | ||
| D. melanogaster I factor | SPTR | sptr:O44317 | 3.3e-08 | N | Class I Line | 0.407% |
| S. mansoni SR2 reverse transcriptase | SPTR | gp:AF025672_1 | 1.0e-06 | Y | ||
| P. spixii CR1-like LINE | SPTR | sptr:O42109 | 5.1e-05 | Y | ||
| D. melanogaster reverse transcriptase | SPTR | pir:A32713 | 7.2e-13 | Y | ||
| A. maritima retrotransposon R2 | SPTR | sptr:O44319 | 2.8e-13 | N | ||
| D. rerioLINE like element | NUCX | gb:AB004653 | 2.2e-28 | Y | ||
| B. baikalensisretrotransposon | NUCX | gb:U18939 | 2.0e-45 | N | ||
| Feline leukemia retrovirus | SPTR | sptr:Q85521 | 2.2e-08 | Y | Retrovirus | 0.055% |
| Walleye epidermal hyperplasia virus type 2 | SPTR | sptr:O36977 | 6.6e-76 | N | ||
| S. salarTc1-like transposon | NUCX | gb:L12206 | 6.7e-102 | N | Class II Tc1-mariner | 0.211% |
| X. laevisTX1 transposon | SPTR | sw:P14381 | 7.2e-59 | Y | ||
| C. elegans Tc1-like transposase | SPTR | sw:Q21679 | 1.5e-10 | Y | ||
| C. elegans Mariner element | SPTR | sptr:Q23373 | 1.5e-14 | N | ||
| Pacific hagfish TC1-like element | SPTR | pir:B46189 | 7.1e-09 | N | ||
| A. albimanus TC1-like sequence | SPTR | sptr:Q16925 | 2.0e-33 | N | ||
| D. melanogaster Hobo element | NUCX | gb:M69216 | 6.3e-07 | N | Class II Hobo | |
| Total | 0.903% |
[i] The first column indicates the description of the best alignment in public protein (SPTR) or in translated nucleic acid (NUCX) databases. In each case the accession number of the best match, the P value of the alignment with the Tetraodon sequence, its presence (Y) or absence (N) in Fugu, its classification, and its contribution in nucleotides to the Tetraodon genome is indicated.