Table 2.

Examples of BLAST Hit Searches Using Different Keywords

Results of “recombination” keyword search
EST BLAST name Score Description of homologous subject sequence
dkfz426_8i24r1.blge815 Gallus gallus putative recombination factor GdRAD54
dkfz426_12d20r1.blsp131 Schizosaccharomyces pombe meiotic recombination  protein rec14
dkfz426_12j22r1.blge1119 G. gallusputative recombination factor GdRAD54
dkfz426_24c4r1.blge896 G. gallusputative recombination factor GdRAD54
Results of “repair” keyword search
EST BLAST name Score Description of homologous subject sequence
dkfz426_214r1.blsp251 G. gallusdna-repair protein complementing  xp-a cells homolog
dkfz426_7j15r1.blsp311 Homo sapiensdna mismatch repair protein msh2
dkfz426_7m3r1.blsp103yeast dna repair protein snm1
dkfz426_8i24r1.bles105 H. sapiensdna-repair protein rad54
dkfz426_12b3r1.blge117 Mus musculus dsb repair protein
dkfz426_12j22r1.blsp237yeast rad54 dna repair protein
dkfz426_15d15r1.bles111 H. sapiensmismatch repair protein msh2
dkfz426_15i15r1.bles113 H. sapiensmismatch repair protein msh2
dkfz426_16a7r1.blsp159 M. musculusdna-repair protein xrcc1
dkfz426_18h22r1.blsp198 H. sapiens mismatch repair protein msh2
dkfz426_21b1r1.blge291 M. musculusmismatch repair protein msh6
dkfz426_22c10r1.blsp185 G. gallusdna-repair protein complement, xp-a
dkfz426_22h7r1.blsp127 M. musculusdna-repair protein xrcc1
dkfz426_23g23r1.blge293 M. musculus mismatch repair protein msh6
dkfz426_24c4r1.blsp166yeast rad54 dna repair protein
Results of “MSH” keyword search
EST BLAST name Score Description of homologous subject sequence
dkfz426_1p7r1.blge281human MSH4
dkfz426_7j15r1.blsp311 H. sapiens dna mismatch repair protein msh2
dkfz426_15d15r1.blge111 H. sapiensmismatch repair protein MSH2
dkfz426_15i15r1.blge113 H. sapiensmismatch repair protein MSH2
dkfz426_18h22r1.bles198 H. sapiensmismatch repair protein MSH2
dkfz426_21b1r1.blge361 H. sapiensmismatch repair protein MSH6
dkfz426_23g23r1.blge363 M. musculusmismatch repair protein MSH6
dkfz426_25l2r1.blge137human serine hydroxymethyltransferase (HUMSHTA)
dkfz426_29b23r1.blge200human tyrosine phosphatase (HUMSHPTP1A)
Results of “terminal deoxinucleotidyl transferase” keyword search
EST BLAST name Score Description of homologous query sequence
dkfz426_15m16r1.blsp110clawed frog terminal deoxynucleotidyltransferase