Table 1.

PCR Primer and Ligation Probe Sequences

Name[i] Sequence[ii](5‘ → 3‘)
CF508-p1GTGCATAGCAGAGTACCTGAAACAGGAAGTA
CF508-p2TGATCCATTCACAGTAGCTTACCCATAGAGG
CF508-AFAM-CATTAAAGAAAATATCAT
CF508-Bp-TGGTGTTTCCTATGA-ROX
CF508-Cp-CTTTGGTGTTTCCTA-TAMRA
BRCAI185-p1AATGGATTTATCTGCTCTTCGCGTTGAAGA
BRCAI185-p2TCATTTGCATAGGAGATAATCATAGGAATCCCAA
BRCAI185-AFAM-ATGCAGAAAATCTTAG
BRCAI185-Bp-TGTCCCATCTGTCT-ROX
BRCAI185-Cp-AGTGTCCCATCTGTC-TAMRA
BRCAI5382-p1GGGTTGTGTTTGGTTTCTTTCAGCATGA
BRCAI5382-p2AGTCTTACAAAATGAAGCGGCCCATCTCT
BRCAI5382-AFAM-AGCAAGAGAATCCC
BRCAI5382-Bp-CAGGACAGAAAGATCT-ROX
BRCAI5382-Cp-AGGACAGAAAGATCTTC-TAMRA
HFE63-p1GCTCTGTCTCCAGGTTCACACTCTC
HFE63-p2GATCCCACCCTTTCAGACTCTGACTC
HFE63-AFAM-GTTCGTGTTCTATGAT
HFE63-Bp-CATGAGAGTCGCC-ROX
HFE63-Cp-GATGAGAGTCGCC-TAMRA
THAL-p1CATGTGGAGACAGAGAAGACTCTTGGG
THAL-p2GCAGCTCACTCAGTGTGGCAAAGG
THAL-AFAM-TCTACCCTTGGACC
THAL-Bp-CAGAGGTTCTTTGAGT-ROX
THAL-Cp-TAGAGGTTCTTTGAGTC-TAMRA
NAT-p1GGGTGGTGTCTCCAGGTCAATCAAC
NAT-p2CTGCCACATCTGGGAGGAGCTTC
NAT282-AFAM-TTAGGAGGGTATTTTTA
NAT282-Bp-CATCCCTCCAGTTAA-TAMRA
NAT282-Cp-TATCCCTCCAGTTAAC-ROX
NAT341-AFAM-ATTCCTGCCGTCA
NAT341-Bp-ATGGTCACCTGCAG-TAMRA
NAT341-Cp-GTGGTCACCTGCAG-ROX
D1S8-p1CCACCCTTCCCACCAAACTACTCAC
D1S8-p2CTTCTACCAATACCACCCTGTCACGTC
D1S8-AFAM-TCCAACCCTAGCC
D1S8-Bp-GATACGGGAACGAC-ROX
D1S8-Cp-AATACGGGAACGAC-TAMRA
s14102-p1TAGCTGTCCATGCAGCGTGATTCACCA
s14102-p2CTCTCCATCCTCTCTCCTCTCACACATTAGTTTACAC
s14102-AFAM-TGGCTTAGTGGTTTC
s14102-Bp-ATTGTTTTATTTTTGTAAA-ROX
s14102-Cp-GTTGTTTTATTTTTGTAAA-TAMRA
RDS-p1TGCTATCCTGTGTCTTCAACTCGCT
RDS-p2GGTAGTACTTCATGCCGTTCTTGAG
RDS-AFAM-CCTGGCTATCTGTGT
RDS-Bp-CCTCTTCAACATCAT-ROX
RDS-Cp-TCTCTTCAACATCAT-TAMRA

[i] p1/p2 are the forward and reverse PCR primers.

[ii] FAM, ROX, and TAMRA are fluorescent donor and acceptor dyes; (p) 5‘-phosphorylation.