The numbers of ORFs listed in Table 1 for Y. lipolytica and D. hansenii differ from those previously published (6703 and 6906) (see Table 2; Dujon et al. 2004). This appears to be due to the removal of pseudogenes from our analysis. When loading data into the e-Fungi database, we identified 151 Y. lipolytica and 579 D. hansenii CDS sequences that were annotated as pseudogenes.

^aGenome sizes estimated from total size of all chromosomes or contigs.

^bGenomes for which complete chromosome sequences are available.

^cNCBI (http://www.ncbi.nlm.nih.gov/Genomes/).

^dGenome sequenced by Kellis et al. 2003.

^eSaccharomyces Genome Database (ftp://genome.ftp.stanford.edu/pub/yeast/data_download/sequence/fungal_genomes/).

^fGenome sequenced by Cliften et al. 2003.

^gKellis et al. 2004, Supplemental data (http://www.nature.com/nature/journal/v428/n6983/extref/nature02424-s1.htm).

^hGenome sequence for C. albicans is for the diploid form (Jones et al. 2004).

ⁱBroad Institute (http://www.broad.mit.edu/annotation/fgi/).

^jDOE Joint Genome Institute (http://www.jgi.doe.gov).

^kCADRE Database (http://www.cadre-genomes.org.uk).

^lDOGAN Database (http://www.bio.nite.go.jp/dogan/MicroTop?GENOME_ID=ao).