Divergence Between Humans and Chimpanzees in Genic and Intergenic Regions
| % CpG | % GC | Loci | % Differences | Compared kb | ts/tv[v] | ||||||||
| mean | SE | ||||||||||||
| 5′ UTRs[i] | 10.2 | 53 | 582 | ||||||||||
| All | 1.12 | 0.040 | 68.7 | 1.80 | |||||||||
| No CpG | 0.77 | 0.035 | 61.8 | 1.78 | |||||||||
| CpG | 4.20 | 0.240 | 7.0 | 1.83 | |||||||||
| CDS[ii] | 5.3 | 51 | 1226 | ||||||||||
| All | 0.45 | 0.010 | 426.7 | 3.67 | |||||||||
| No CpG | 0.28 | 0.008 | 404.2 | 3.13 | |||||||||
| CpG | 3.44 | 0.122 | 22.5 | 4.80 | |||||||||
| nd sites[iii] | 4.8 | 47 | 1226 | ||||||||||
| All | 0.22 | 0.009 | 272.8 | 2.75 | |||||||||
| No CpG | 0.16 | 0.008 | 259.7 | 2.12 | |||||||||
| CpG | 1.48 | 0.105 | 13.2 | 5.50 | |||||||||
| 4d sites[iv] | 7.3 | 48 | 1226 | ||||||||||
| All | 1.09 | 0.042 | 61.9 | 3.05 | |||||||||
| No CpG | 0.54 | 0.030 | 57.3 | 2.36 | |||||||||
| CpG | 8.16 | 0.407 | 4.5 | 3.87 | |||||||||
| 3′UTRs[i] | 2.8 | 42 | 1071 | ||||||||||
| All | 0.86 | 0.016 | 321.2 | 2.18 | |||||||||
| No CpG | 0.63 | 0.014 | 312.0 | 1.81 | |||||||||
| CpG | 8.85 | 0.297 | 9.1 | 3.68 | |||||||||
| Intergenic | 3.3 | 47 | 5604 | ||||||||||
| All | 1.28 | 0.010 | 1268.1 | 2.34 | |||||||||
| No CpG | 0.89 | 0.008 | 1226.2 | 1.78 | |||||||||
| CpG | 12.96 | 0.164 | 41.8 | 4.65 | |||||||||
| Intronic | 3.5 | 48 | 2691 | ||||||||||
| All | 1.20 | 0.014 | 597.7 | 2.42 | |||||||||
| No CpG | 0.80 | 0.012 | 576.6 | 1.82 | |||||||||
| CpG | 12.11 | 0.224 | 21.2 | 4.56 | |||||||||
[i] UTRs—untranslated regions.
[ii] CDS—coding sequence.
[iii] nd sites—non-degenerative sites.
[iv] 4d sites—four-/dd degenerative sites.
[v] ratio of transitions (ts) over transversions (tv).