Table 1.

The Performance of Complexity Reduction for CRASA

No. of CRASA matches
Matching lengthMatched fragments
 ≥20 bp367,359,815
 ≥30 bp37,801,885
 ≥40 bp4,717,948
 ≥50 bp835,533
No. of ESTs (cach matched   fragment ≥50 bp)Matched ESTs
 No. of fragments per EST ≥1109,102
 No. of fragments per EST ≥265,817
 No. of fragments per EST ≥348,268
 After removing repetitive elements2880
 No. of patched fragments per EST ≥31681
 After removing the fragment   in inconsistent order515

[i] The query sequence is human Chromosome 21 (∼34 Mb).