Markup | Genome Research

Table 1.

Accuracy With Respect to RefSeq as a Function of Mouse Genome Sequence Used

	GENSCAN (none)	1× mouse	2× mouse	3× mouse	4× mouse	Assembly	Syntenic regions
Exact gene sensitivity	8.91	10.34	11.76	13.16	13.81	14.31	13.47
Exact gene specificity	2.62	5.55	6.02	6.54	6.78	6.99	6.89
Exact exon sensitivity	68.48	64.99	68.50	69.54	70.27	71.21	70.80
Exact exon specificity	24.45	38.72	38.57	40.33	40.57	40.61	39.97
Nucleotide sensitivity	86.29	79.85	81.91	81.92	82.30	82.82	83.39
Nucleotide specificity	29.57	42.35	42.31	43.88	44.09	44.14	42.98