BAC End Sequence Compositions
| Library name | Total # of sequences[i] | Known retrotransposon (%)[ii] | Other repetitive DNA (%)c | Known gene (%)d | Chloroplast DNA (%)e | Ribosomal DNA (%)f |
| HpaII BACs | 292 | 72 (25%) | 30 (10%) | 16 (5.5%) | 12 (4%) | 2 (0.7%) |
| SalI BACs (10–15 kb) | 147 | 34 (23%) | 13 (8.8%) | 20 (14%) | 25 (17%) | 2 (1.4%) |
| SalI BACs (15–25 kb) | 163 | 30 (18%) | 16 (10%) | 29 (18%) | 8 (5%) | 0 (0%) |
| EcoRI BACs | 149 | 77 (52%) | 21 (14%) | 2 (1.3%) | 2 (1.3%) | 2 (1.3%) |
[i] Sequences with high quality bases ≥ 100
[ii] TBLASTX, c,e,fBLASTN and dBLASTX cut off E < 10−5.