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Table 1.

Structure of 73 Human RP Genes

Gene		Size bp		CDS bp		No. of exons		GC cont[i] percent		CT tract bp		Position[ii] of ATG	Exon 1 bp	5′ UTR bp	3′ UTR bp	Accession no.
Gene		Size bp		CDS bp		No. of exons		GC cont[i] percent		CT tract bp		Position[ii] of ATG	Exon 1 bp	5′ UTR bp	3′ UTR bp	Gene	5′ UTR
RPSA	5739	888	7	61	8	36	45	78	66	U43901	D28372
RPS2	2757	882	7	67	12	6	20	23	28	AC005363	AB055772 [iv]
RPS3	6172	732	7	60	14	−27	60	30	78	AB061838 [iv]	D28344
RPS3A	5012	795	6	62	7	−59	87	25	38	AB062070 [iv] Z83334	D28374
RPS4X	4609	792	7	63	12	0	26	23	61	AF041428	D28359
RPS4Y	25349	792	7	49	9	0	26	23	56	AF041427	AB055773 [iv]
RPS5[iii]	—	615	—	59	9	4	71	72	54	AB061852 [iv] AB061853 [iv]	D28455
RPS6	3980	750	6	58	11	−3	48	42	38	X67309	D28348
RPS7	5571	585	7	64	9	21	26	44	21	Z25749	AB055774 [iv]
RPS8	3162	627	6	66	11	−1	27	23	55	AB061855 [iv] X67247	D28361
RPS9	6787	585	5	57	10	28	31	56	69	AB061839 [iv]	AB055774 [iv]
RPS10	8616	498	6	63	13	3	38	38	52	AL157372	D28427
RPS11	3258	477	5	60	16	−12	42	27	52	AB028893	D28407
RPS12	2985	399	6	59	10	40	46	83	14	AB061840 [iv]	D28378
RPS13	3269	456	6	62	10	−20	49	26	39	AB062067 [iv] D88010	D28429
RPS14	5398	456	5	62	12	5	37	39	45	AB061858 [iv] M13934	D28352
RPS15	2084	438	4	67	8	0	22	19	31	M32405	AB055776 [iv]
RPS15A	7369	393	5	61	10	8	25	30	42	AC020716	D28347
RPS16	2737	441	5	66	12	−45	102	54	60	AB061841 [iv]	D28392
RPS17	3670	408	5	68	11	0	27	24	45	AB062068 [iv] M18000	AB055777 [iv]
RPS18	4429	459	6	55	11	0	46	43	39	AL031228	AB055778 [iv]
RPS19	11158	438	6	72	13	3	33	33	39	AC010616	D28389
RPS20	1448	360	4	67	13	0	126	123	31	AB061842 [iv]	D28358
RPS21	1416	252	6	73	15	21	33	51	53	AB061843 [iv]	D28422
RPS23	2290	432	4	62	12	−1	35	31	43	AC005406	D28396
RPS24	4459	402	5	60	16	0	42	39	75	AB062069 [iv] U12202	D28424
RPS25	2634	378	5	60	10	0	66	63	48	AB061844 [iv]	D28369
RPS26	2029	348	4	55	6	0	30	27	66	AB061856 [iv] U41448	AB056456 [iv]
RPS27	1387	255	4	53	9	−3	40	34	54	AB061845 [iv]	D28454
RPS27A	2926	471	6	54	12	20	25	42	32	AB062071 [iv] AB061854 [iv]	D28404
RPS28	895	210	4	67	9	−36	70	31	139	AB061846 [iv]	AB055779 [iv]
RPS29	2799	171	3	57	12	−59	93	31	88	AB061847 [iv]	AB055780 [iv]
RPS30	1503	402	5	65	16	11	45	53	50	AB061859 [iv] X65921	D28403
RPL3	6740	1212	10	62	5	0	30	27	55	AL022326	D28415
RPL4	5517	1284	10	50	12	0	59	56	87	AB061820 [iv]	D23660
RPL5	9885	894	8	61	10	0	78	75	59	AB061848 [iv] AL162740	AB055762 [iv]
RPL6	4415	867	7	54	11	3	19	19	33	AB042820	D28388
RPL7[iii]	—	762	—	48	14	−11	38	24	—	L16557	AB055763 [iv]
RPL7A	3225	801	8	62	25	0	25	22	59	X52138	D28405
RPL8	2622	774	6	73	11	14	25	36	35	AB061821 [iv]	D28421
RPL9	4784	579	8	58	10	4	25	26	103	U09954	D28399
RPL10	2540	645	7	61	13	26	18	41	63	AB061857 [iv] M81806	D28410
RPL10A	2381	654	6	67	10	−2	36	31	34	AL022721	AB055764 [iv]
RPL12	3730	498	7	63	6	−34	125	88	45	AL445222	D28443
RPL13A	4254	612	8	61	14	−12	38	23	43	AB028893	D28409
RPL14	4960	663	6	64	14	0	32	29	42	AB061822 [iv]	AB055765 [iv]
RPL15	2360	615	4	65	13	13	26	36	6	AB061823 [iv]	D28417
RPL17	4003	555	7	54	16	16	26	39	35	AB061824 [iv]	D28373
RPL18	3867	567	7	64	12	0	36	33	41	AB061825 [iv]	D28461
RPL18A	3394	531	5	67	9	−15	53	35	52	AC005796	D28393
RPL19	4411	591	6	57	12	−2	33	28	79	AC004408	AB055766 [iv]
RPL21	5017	483	6	61	13	15	28	40	43	AB061826 [iv]	D28406
RPL22	12978	387	4	67	11	−9	35	23	53	AB061849 [iv] AL031847	D28346
RPL23	3645	423	5	54	19	−10	39	26	41	AB061827 [iv]	D28349
RPL23A	2968	471	5	56	8	−22	37	12	54	AF001689	D28401
RPL24	5606	474	6	55	16	−2	47	42	43	AB061828 [iv]	D28400
RPL26	5664	438	4	58	14	8	37	42	41	AB061829 [iv]	D28413
RPL27[iii]	—	411	—	59	16	5	33	35	25	AB061850 [iv] AB061851 [iv]	D28453
RPL27A	3052	447	5	65	12	0	25	22	39	AB020236	AB055767 [iv]
RPL30	3824	348	5	59	13	35	42	74	75	AB070559 [iv]	D28438
RPL31	4130	378	5	61	12	3	27	27	37	AB061830 [iv]	D28386
RPL32	5512	408	4	51	17	8	48	53	63	AB061831 [iv]	D28385
RPL34	4652	354	5	53	18	12	24	33	17	AB061832 [iv]	D28420
RPL35	4078	372	4	72	15	0	52	49	34	AL354928	D28448
RPL36	1370	318	4	67	7	5	32	34	44	AB061833 [iv]	AB055769 [iv]
RPL36A	2881	321	5	58	13	0	36	33	50	U78027	D28414
RPL37	2758	294	4	60	7	0	30	27	49	AB061834 [iv]	AB055770 [iv]
RPL39	5137	156	3	60	7	0	70	67	178	AB061835 [iv]	D28397
RPL40	3381	387	5	70	14	11	31	39	90	X56997	D28425
RPL41	1200	78	4	52	10	16	27	40	303	AB062066 [iv] AB010874	D28462
RPP0	4405	954	8	63	10	51	29	77	66	AC004263	D28418
RPP1	2727	345	4	62	11	−69	202	130	38	AB061836 [iv]	D28366
RPP2	2906	348	5	71	17	4	73	74	38	AB061837 [iv]	D28411
Average	4413	521	5.6	61	12	0.0	45	42	56

[i] GC content between −250 and +250 bp.

[ii] Relative position of the initiator ATG with respect to the first intron boundaries; e.g., Ae’0'Åf means localization of the ATG at the 3′ end of exon 1; ‘3’ at the 5′ end of exon 2.

[iii] Partial sequence, not included in the calculation of the average values.

[iv] Sequence determined in this study.