[i] Autofinish (versions 5.0 to 9.0) was used on these projects at the University of Washington during 1998 and 1999. All are 150-kb to 200-kb BACs except for PA01, the six-megabase Pseudomonas aeruginosa bacterial genome. Immediately after shotgun, Autofinish was run for three rounds on each project: Each time, the lab made the reads suggested by Autofinish (without adding or removing any suggested reads) and reassembled the project. After this, if the project was still not finished, a human finisher manually completed the project. All of these projects have been submitted to GenBank as Phase 3 Complete sequence. (No. of finishing reads) The sum of Autofinish-selected reads and human-selected reads. (No. of Autofinish reads [% Autofinish Reads] The number and percentage of finishing reads that were suggested by Autofinish.