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Table 1.
cSNP Identification
Method
Number of SNPs
Confirmed
1. snp_detect
263
12/16 (75%)
2. PowerBLAST
117 (54 overlap with 1)
16/20 (80%)
3. Gene targeted
60 (9 overlap with 1 and 2)
60
Total (non redundant)
377
88 (32%)