Markup | Genome Research

Table 1.

Organization of the Zebrafish Mitochondrial Genome

Gene/element	Strand	Position	Size	Start	Stop	3′
Control region	—	1–950	951	—	—	0
tRNA^phe	H	951–1019	69	—	—	0
12S rRNA	H	1020–1971	952	—	—	0
tRNA^val	H	1972–2042	71	—	—	0
16S rRNA	H	2043–3725	1683	—	—	0
tRNA^leu(TAA)	H	3726–3802	77	—	—	0
ND1	H	3803–4777	975	ATG	TAA	3
tRNA^ile	H	4781–4854	74	—	—	−3
tRNA^gln	L	4852–4922	71	—	—	1
tRNA^met	H	4924–4992	69	—	—	0
ND2	H	4993–6039	1047	ATG	TAG	0
tRNA^trp	H	6038–6107	70	—	—	1
tRNA^ala	L	6109–6176	68	—	—	1
tRNA^asn	L	6178–6250	73	—	—	0
O_L	—	6251–6282	32	—	—	0
tRNA^cys	L	6283–6354	72	—	—	−2
tRNA^tyr	L	6353–6423	71	—	—	1
COI	H	6425–7975	1551	GTG	TAA	0
tRNA^ser (TGA)	L	7976–8046	71	—	—	2
tRNA^asp	H	8049–8117	69	—	—	12
COII	H	8130–8820	691	ATG	T. .	0
tRNA^lys	H	8821–8893	73	—	—	0
ATP8	H	8894–9058	165	ATG	TAA	−7
ATP6	H	9052–9735	684	ATG	TAA	−1
COIII	H	9735–10520	786	ATG	TAG	−1
tRNA^gly	H	10520–10589	70	—	—	0
ND3	H	10590–10940	351	ATG	TAG	−2
tRNA^arg	H	10939–11008	70	—	—	0
ND4L	H	11009–11305	297	ATG	TAA	−7
ND4	H	11299–12680	1382	ATG	TA.	0
tRNA^his	H	12681–12750	70	—	—	−1
tRNA^ser (GCT)	H	12750–12819	70	—	—	1
tRNA^leu (TAG)	H	12823–12895	73	—	—	1
ND5	H	12897–14717	1821	ATG	TAA	−4
ND6	L	14714–15232	519	ATG	TAA	0
tRNA^glu	L	15233–15301	69	—	—	6
Cytb	H	15308–16448	1141	ATG	T. .	0
tRNA^thr	H	16449–16520	72	—	—	5
tRNA^pro	L	16527–16596	70	—	—	0

[i] L and H refer to light and heavy strands, respectively. The 3′ column indicates the number of nucleotides downstream to the start of the next gene (this is the 5′ end of genes on the L strand). The value is negative for genes with overlapping reading frames.