Table 1.

Summary of aDNA Library Clone Sequence Comparison to Nucleic Acid Database Entries

GenBank accession number Clone I.D. Insert size (bp) Database Sequence match (chromosome/gene/cDNA/repeat)
AF179028 ALP2321
AF179029 ALP3403ALL Alurepeat
AF179030 ALP5334HTGS22q11.2
AF179031 ALP6276ALLL1 repeat
AF179032 ALP7322CpG island
AF179033 ALP10456nr/ESTgene/cDNA/CpG island
AF179034 ALP11212ALLL1 repeat
AF179035 ALP12355
AF179036 ALP13368ESTcDNA
AF179037 ALP14358
AF179038 ALP15308
AF179039 ALP17465nr17
AF179040 ALP19341
AF179041 ALP20272
AF179042 ALP21356ESTcDNA
AF179043 ALP22353
AF179044 ALP24f>600HTGS
AF179045 ALP24r
AF179046 ALP25304
AF179047 ALP27>600nrgene
AF179048 ALP28f>600ALLsatellite repeat
AF179049 ALP28r
AF179050 ALP30361HTGS/ALL6/Alu repeat
AF179051 ALP31321HTGS/EST7q33-35/cDNA/CpG island
AF179052 ALP32273ALLMER repeat
AF179053 ALP33432
AF179054 ALP34302
AF179055 ALP35f>500nrgene/CpG island
AF179056 ALP35r
AF179057 ALP36325ALL Alu repeat
AF179058 ALP38299ALLL1 repeat
AF179059 ALP39239EST/STS2,1103.7 cR from pTEL/cDNA/STS
AF179060 ALP41361EST/HTGScDNA
AF179061 ALP43563ALLretrovirus
AF179062 ALP44637nr/ALL22q11.2/MER repeat
AF179063 ALP45370
AF179064 ALP46320nrCpG island
AF179065 ALP47r>600
AF179066 ALP49211
AF179067 ALP50339
AF179068 ALP51f>500CpG island
AF179069 ALP51r
AF179070 ALP53118nr/EST4q31 & 19:13.1–13.3/Sst1 repeat/cDNA
AF179071 ALP55534
AF179072 ALP58156
AF179073 ALP59327HTGS/ALLL1 repeat
AF179074 ALP60372nr6q21–22/CpG island
AF179075 ALP61441ALLL1 repeat/CpG island
AF179076 ALP63348ALL Alurepeat
AF179077 ALP67f>600nr/HTGSgene/CpG island
AF179078 ALP67r
AF179079 ALP68316
AF179080 ALP69483nr5p15.2
AF179081 ALP71623ESTcDNA/CpG island
AF179082 ALP72304
AF179083 ALP74317nr/ESTgene/cDNA/CpG island
AF179084 ALP75583ALLL1 repeat/cDNA/CpG island
AF179085 ALP77373HTGS/ALL5/Alurepeat
AF179086 ALP78392
AF179087 ALP79310
AF179088 ALP80465EST/HTGScDNA
AF179089 ALP82329ESTcDNA/CpG island
AF179090 ALP83f>500nr/EST6p21.21–21.31/
AF179091 ALP83r cDNA/CpG island
AF179092 ALP84355ALL Alurepeat
AF179093 ALP86332HTGS6
AF179094 ALp87212HTGS
AF179095 ALP88512
AF179096 ALP89f>400
AF179097 ALP89r
AF179098 ALP90f>300ALL Alurepeat
AF179099 ALP91348
AF179100 ALP93307ALLMER/Alurepeat
AF179101 ALP94317nrCpG island
AF179102 ALP95393HTGS8p11/CpG island
AF179103 ALP96370ESTcDNA
AF179104 ALP98346nr/HTGS5q/CpG island
AF179105 ALP99307
AF179106 ALP100262nr/ESTIq24/cDNA
AF179107 ALP101374
AF179108 ALP103331
AF179109 ALP104368nr22q11/gene/CpG island
AF179110 ALP105424ALL Alu & other repeats
AF179111 ALP106345nr/gss Sau3/satellite repeat
AF179112 ALP107326nr/EST/gssgene/cDNA
AF179113 ALP108285HTGS/ALLMER repeat
AF179114 ALP109350
AF179115 ALP110352nr7p15–21
AF179116 ALP111259ALL Alurepeat
AF179117 ALP112482nr/EST/HTGS12p13 and 14 gene/cDNA/CpG island
AF179118 ALP113361ESTcDNA
AF179119 ALP114343nrgene
AF179120 ALP117221nr7q31
AF179121 ALP118294EST/ALLcDNA/L1 repeat
AF179122 ALP119358nr/EST/ALL9/cDNA/Alurepeat
AF179123 ALP120306nr/EST22q11.2/gene/cDNA
AF179124 ALP121318CpG island
AF179125 ALP122709nr/EST22q11.2/cDNA/CpG island
AF179126 ALP123326nr17
AF179127 ALP124257
AF179128 ALP125310
AF179129 ALP126273ALL Alurepeat
AF179130 ALP127480EST/ALLcDNA/L1 repeat
AF179131 ALP128278ALLTHE/THR repeat
AF179132 ALP129318nr/HTGS21p11.2/gene/CpG island
AF179133 ALP130293
AF179134 ALP131423
AF179135 ALP133329nr/EST4q35-qter/cDNA CpG island/
AF179136 ALP135482nr/ESTcDNA/CpG island
AF179137 ALP136328ALLMER repeat
AF179138 ALP137623HTGS/ALL6/MSTA B repeat
AF179139 ALP138417
AF179140 ALP139628ALL Alurepeat/CpG island
AF179141 ALP140417nr/ESTcDNA/CpG island/gene
AF179142 ALP141425
AF179143 ALP142540EST/HTGScDNA
AF179144 ALP143410nr/ESTgene/cDNA
AF179145 ALP144400ALLL1 repeat
AF179146 ALP145636nr5q
AF179147 ALP146407HTGS/ALL5/Alurepeat
AF179148 ALP147302EST/ALLcDNA/MER repeat
AF179149 ALP148573nr/HTGS22
AF179150 ALP149482ALL Alurepeat
AF179151 ALP150440HTGS
AF179152 ALP151529HTGS/EST6/cDNA
AF179153 ALP153445cDNA
AF179154 ALP154409ALL Alurepeat
AF179155 ALP155362
AF179156 ALP156300ESTcDNA/CpG island
AF179157 ALP157477nr/HTGS16/7q11.23/19q13.2/CpG island
AF179158 ALP158640EST/ALLLTR repeat/cDNA
AF179159 ALP159470nr/EST17, 394.1 cR from pTEL/gene/cDNA
AF179160 ALP160340HTGS21
AF179161 ALP161375nrretrovirus
AF179162 ALP162354nrgene
AF179163 ALP163347ALLCA dinucleotide repeat
AF179164 ALP164351
AF179165 ALP165421
AF179166 ALP166336nr/ALL19/MER/Alurepeat
AF179167 ALP167399
AF179168 ALP168354nr/ESTgene/cDNA
AF179169 ALP169385
AF179170 ALP170257
AF179171 ALP171349nrretrovirus
AF179172 ALP172332ALL Alurepeat
AF179173 ALP173184ALLL1 repeat
AF179174 ALP174163ALLL2 repeat
AF179175 ALP175366ALL Alurepeat
AF179176 ALP176191HTGS15q26.1
AF179177 ALP177198nr17
AF179178 ALP178226
AF179179 ALP179253
AF179180 ALP180194nr17

[i] Each sequence was compared with those of the nonredundant (nr) nucleic acid database together with the EST, STS, high-throughput genomic sequence (HTGS), and genome survey sequence (gss) databases. ALL denotes clones that displayed high sequence identity with at least one entry of each database employed. CpG islands were identified by computational analysis.